Data Integration and Platform Unification Challenges in Marine Bioinformatics

Event: COSMEC and ANEMONE Global Joint Symposium 2026

Date: 2026-02-06

Location: Tokyo, Japan

In this talk, I have discussed the challenges of data integration and platform unification in marine bioinformatics, with a focus on the ANEMONE project. I have highlighted the importance of integrating diverse datasets and unifying platforms to enhance our understanding of marine ecosystems and improve conservation efforts.

Slides

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The 11th EAFES International Congress - Context-Aware Marine Plankton Classification with Multimodal Large Language Model and Retrieval-Augmented Generation Reasoning

Event: The 11th EAFES International Congress

Date: 2025-07-20

Location: Tokyo, Japan

EAFES2025 Website: https://eafes2025.com/index.html

Abstract | Poster

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IMBC2025 Oral Presentation Awards - Automated Taxonomic Identification of Marine Plankton

Event: International Marine Biotechnology Congress 2025

Date: 2025-07-08

Location: Brest, France

Oral presentation of my work on "Automated Taxonomic Identification of Marine Plankton Using a Large-Language-Model and Retrieval-Augmented-Generation Framework." With my presentation, I recieived IMBC organization awards for other outstanding oral presentations. IMBC2025 Website: https://www-iuem.univ-brest.fr/imbc-2025/?lang=e

Slides | Abstract

Image from IMBC2025 Oral Presentation Awards - Automated Taxonomic Identification of Marine Plankton Image from IMBC2025 Oral Presentation Awards - Automated Taxonomic Identification of Marine Plankton Image from IMBC2025 Oral Presentation Awards - Automated Taxonomic Identification of Marine Plankton

Semantic Plankton: Multimodal LLMs and RAG for Automated Ocean Microorganism Analysis

Event: Earth, Sea and Sky XI: Workshop for International Joint Graduate Program & Core Research Cluster in Earth and Environmental Sciences

Date: 2025-06-03

Location: Tohoku University, Sendai, Japan

Poster presentation on my Semantic Plankton project, in the event organized by Tohoku University and GP-EES, focusing on the use of multimodal large language models (LLMs) and retrieval-augmented generation (RAG) techniques for automated analysis of ocean microorganisms.

Abstract | Poster

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WPI-AIMEC workshop at Hawaii University

Event: Advance Institute for Marine Ecosystem and Climate (AIMEC) Workshop

Date: 2025-03-04

Location: Hawaii University, Hawaii, USA

Gave a talk on applications of Multimodal Large Language Models (LLMs) in marine ecosystem research, main example is from my Semantic Plankton project. Check out the slides for more details on the implementations.

Slides

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